BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022A09LP1|AL427848
(768 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1622 1337 0.0
>3x_Contig1622
Length = 13445
Score = 1337 bits (659), Expect = 0.0
Identities = 708/741 (95%)
Strand = Plus / Plus
Query: 27 tctgcccgcmcgccttcgacgctagaagtccaaccggttaatgtatatvacgatggatcg 86
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 3270 tctgcccgcacgccttcgacgctagaagtccaaccggttaatgtatataacgatggatcg 3329
Query: 87 ggaccagtaatgggtcaactgcagtcgcaaacmagccgtagaaatactaattcatcgaat 146
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 3330 ggaccagtaatgggtcaactgcagtcgcaaacaagccgtagaaatactaattcatcgaat 3389
Query: 147 tcmaacaataactcttttgataaggaaatmccaagcgatgmaaaaggscataatccggrt 206
|| |||||||||||||||||||||||||| |||||||||| |||||| |||||||||| |
Sbjct: 3390 tcaaacaataactcttttgataaggaaataccaagcgatgaaaaaggacataatccggat 3449
Query: 207 caacatttctctgaacaagaatctttaacaacagatcaaggttccgaaaacatctcggat 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3450 caacatttctctgaacaagaatctttaacaacagatcaaggttccgaaaacatctcggat 3509
Query: 267 gaatatgamgatgaatttgatgaagacgagttttgactatttttcmmggaactacaaatm 326
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 3510 gaatatgaagatgaatttgatgaagacgagttttgactatttttcaaggaactacaaata 3569
Query: 327 cagtccatcaggrttatacagacattatgtacctcagtgcagaacatcatgaatttcatg 386
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 3570 cagtccatcaggattatacagacattatgtacctcagtgcagaacatcatgaatttaatg 3629
Query: 387 acggcatgagttgaaaagcacgagagtcammvtgcccaagavtattgcttgccatacccc 446
||||||||||||||||||||||||||| | ||||||||| |||||||||| |||||||
Sbjct: 3630 acggcatgagttgaaaagcacgagagtaaaaatgcccaagaatattgcttgcaatacccc 3689
Query: 447 cagttttgavctgttactatgttgggagtcggattaacatttcctcattcattcamagta 506
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 3690 cagttttgaactgttactatgttgggagtcggattaacatttcctcattcattcaaagta 3749
Query: 507 cctagtcactcgtatttmgamatvmtatmcgcttcagatcggtatgacccatatatgtaa 566
||||||||||||||||| || || ||| ||||| ||||| |||||||||||||||||
Sbjct: 3750 cctagtcactcgtatttagaaataatataaacttcaaatcggaatgacccatatatgtaa 3809
Query: 567 aavatttctaacctagtttgacaatcttcctatccagctgatggagtaatttcaatattt 626
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3810 aaaatttctaacctagtttgacaatcttcctatccagctgatggagtaatttcaatattt 3869
Query: 627 agtaatgadatcgcttacacctgttggtaaaattttgacggagattgatttctacatttt 686
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3870 agtaatgaaatcgcttacacctgttggtaaaattttgacggagattgatttctacatttt 3929
Query: 687 tatttacttctatgtcttgtcatgtcgctggatttaaataacattgctcgcctgggtaag 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3930 tatttacttctatgtcttgtcatgtcgctggatttaaataacattgctcgcctgggtaag 3989
Query: 747 tggttcttttacttactattt 767
|||||||||||||||||||||
Sbjct: 3990 tggttcttttacttactattt 4010
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.715 1.33
Gapped
Lambda K H
1.41 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4009
Number of Sequences: 1807
Number of extensions: 4009
Number of successful extensions: 102
Number of sequences better than 1.0e-20: 1
length of query: 768
length of database: 10,358,551
effective HSP length: 16
effective length of query: 752
effective length of database: 10,329,639
effective search space: 7767888528
effective search space used: 7767888528
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.9 bits)